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PDBsum entry 8c1c
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Pore analysis for: 8c1c calculated with  MOLE 2.0
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PDB id
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8c1c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.61 |
3.46 |
64.3 |
-1.60 |
-0.52 |
23.6 |
81 |
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6 |
4 |
3 |
2 |
1 |
1 |
0 |
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2 |
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2.18 |
2.77 |
100.0 |
-1.78 |
-0.48 |
17.5 |
87 |
9 |
4 |
10 |
4 |
1 |
1 |
0 |
NAG 1 A MAN 4 A BMA 3 G MAN 4 G
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3 |
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1.37 |
1.46 |
123.6 |
-1.02 |
-0.01 |
13.0 |
80 |
6 |
3 |
10 |
9 |
6 |
4 |
0 |
NAG 1 A NAG 1 D NAG 2 D NAG 1 F NAG 2 F MAN 4 G
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4 |
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1.37 |
1.45 |
140.0 |
-0.63 |
0.00 |
11.6 |
78 |
8 |
2 |
7 |
11 |
5 |
4 |
0 |
NAG 1 D NAG 2 D NAG 1 F NAG 2 F
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5 |
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2.14 |
2.34 |
38.6 |
-0.52 |
-0.50 |
5.5 |
92 |
0 |
1 |
5 |
2 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program