 |
PDBsum entry 8bsu
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8bsu calculated with  MOLE 2.0
|
PDB id
|
|
|
|
8bsu
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
20 pores,
coloured by radius |
|
21 pores,
coloured by radius
|
21 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.57 |
1.57 |
38.1 |
-1.64 |
-0.32 |
22.9 |
76 |
|
6 |
3 |
3 |
3 |
3 |
0 |
0 |
|
|
 |
|
2 |
 |
1.60 |
1.60 |
39.9 |
-1.82 |
-0.31 |
27.0 |
78 |
7 |
3 |
2 |
5 |
3 |
0 |
0 |
|
|
3 |
 |
2.84 |
3.59 |
45.2 |
-2.11 |
-0.22 |
27.4 |
75 |
9 |
2 |
3 |
4 |
2 |
0 |
0 |
|
|
4 |
 |
1.77 |
1.90 |
48.4 |
-2.44 |
-0.47 |
30.1 |
75 |
9 |
3 |
3 |
1 |
1 |
0 |
0 |
|
|
5 |
 |
2.10 |
2.26 |
55.6 |
-1.02 |
-0.16 |
15.6 |
80 |
7 |
3 |
4 |
5 |
2 |
0 |
0 |
|
|
6 |
 |
1.59 |
1.61 |
71.9 |
-1.99 |
-0.41 |
23.7 |
77 |
8 |
5 |
4 |
2 |
3 |
0 |
0 |
|
|
7 |
 |
1.81 |
1.79 |
142.0 |
-2.94 |
-0.51 |
37.9 |
76 |
16 |
14 |
4 |
2 |
4 |
0 |
0 |
SO4 307 G
|
|
8 |
 |
1.86 |
2.02 |
145.3 |
-2.28 |
-0.45 |
30.1 |
78 |
17 |
10 |
4 |
7 |
2 |
2 |
0 |
SO4 308 A
|
|
9 |
 |
2.33 |
2.43 |
32.2 |
-1.93 |
-0.43 |
23.6 |
80 |
6 |
3 |
1 |
4 |
1 |
0 |
0 |
|
|
10 |
 |
1.49 |
3.11 |
34.5 |
-1.00 |
-0.14 |
20.8 |
79 |
5 |
3 |
2 |
3 |
3 |
0 |
0 |
CL 306 C ZN 301 H
|
|
11 |
 |
1.51 |
3.10 |
38.6 |
-1.37 |
-0.34 |
24.0 |
78 |
6 |
5 |
2 |
3 |
3 |
0 |
0 |
ZN 301 H
|
|
12 |
|
2.17 |
3.67 |
41.9 |
-2.58 |
-0.38 |
28.4 |
75 |
9 |
3 |
2 |
4 |
2 |
0 |
0 |
CL 306 C
|
|
13 |
|
1.67 |
1.80 |
48.6 |
-2.09 |
-0.43 |
32.9 |
81 |
8 |
7 |
1 |
5 |
1 |
0 |
0 |
|
|
14 |
|
2.03 |
2.33 |
51.1 |
-2.92 |
-0.62 |
34.7 |
77 |
8 |
4 |
2 |
1 |
1 |
0 |
0 |
CL 306 C GOL 311 E
|
|
15 |
|
1.39 |
2.76 |
53.7 |
-1.01 |
-0.20 |
20.7 |
82 |
6 |
6 |
3 |
6 |
3 |
0 |
0 |
ZN 302 B
|
|
16 |
|
1.38 |
2.76 |
56.7 |
-1.41 |
-0.24 |
24.9 |
80 |
8 |
5 |
3 |
6 |
3 |
0 |
0 |
ZN 302 B CL 306 C
|
|
17 |
|
1.76 |
2.04 |
58.1 |
-1.50 |
-0.41 |
21.1 |
81 |
6 |
4 |
4 |
3 |
2 |
0 |
0 |
GOL 311 E
|
|
18 |
|
1.59 |
1.57 |
68.1 |
-1.76 |
-0.44 |
28.8 |
83 |
8 |
7 |
3 |
3 |
2 |
0 |
0 |
GOL 311 E ZN 301 H
|
|
19 |
|
2.10 |
2.22 |
68.4 |
-1.17 |
-0.23 |
20.6 |
71 |
3 |
3 |
2 |
3 |
0 |
1 |
0 |
|
|
20 |
|
1.59 |
1.81 |
92.2 |
-2.73 |
-0.59 |
32.3 |
83 |
12 |
9 |
8 |
4 |
2 |
0 |
0 |
SO4 309 B ACT 311 B SO4 307 H
|
 |
21 |
|
1.45 |
2.40 |
131.5 |
-2.49 |
-0.54 |
32.3 |
83 |
12 |
11 |
6 |
4 |
0 |
0 |
0 |
SO4 309 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program