PDBsum entry 8abf Go to PDB code:  Pore analysis for: 8abf calculated with MOLE 2.0 PDB id 8abf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 1.68 33.5 -0.94 -0.52 18.9 84 3 5 0 3 1 0 0   2 1.66 2.21 34.2 -1.48 -0.42 21.6 81 5 3 3 7 1 1 0  CDL 505 C 3 1.43 1.69 35.0 -1.43 -0.05 24.7 90 6 1 2 3 1 0 0   4 3.32 4.53 43.7 -0.42 -0.11 15.4 75 4 3 0 6 2 3 0   5 1.66 2.22 44.3 -0.90 -0.31 16.2 81 5 5 4 5 3 1 0   6 2.26 2.31 45.1 -0.93 0.00 20.2 85 6 2 1 6 1 3 0  HEC 401 O 7 1.44 1.70 46.1 -0.68 -0.04 14.8 86 4 1 3 7 2 3 0  HEC 401 O 8 2.50 2.65 56.8 -1.26 -0.18 24.4 83 7 7 2 5 1 3 0  HEC 401 O 9 1.43 1.70 57.9 -0.93 -0.14 19.0 83 5 6 4 6 2 3 0  HEC 401 O 10 2.88 3.39 66.8 -0.70 -0.21 16.8 82 5 9 4 8 3 3 0  HEC 401 D 11 2.75 4.61 68.1 -1.21 -0.13 23.2 76 10 7 3 6 4 3 0  LMT 302 P 12 2.05 2.09 83.1 -0.55 -0.21 11.0 83 3 6 5 7 2 3 1  HEC 401 O 13 2.23 3.62 87.9 0.35 0.17 16.1 82 11 4 3 21 2 0 0  CDL 505 C CDL 3001 L CDL 3002 L PTY 504 N LMT 302 P PTY 303 P PC1 201 T 14 2.19 2.68 88.9 -1.09 -0.44 19.5 71 3 9 1 5 5 3 0   15 2.15 2.63 98.1 -1.33 -0.50 21.4 71 3 7 1 5 3 5 0   16 2.96 4.35 120.3 -1.20 -0.27 22.7 81 12 14 6 13 4 3 0  LMT 302 P 17 1.81 1.98 122.9 -1.76 -0.30 22.1 77 11 9 8 13 6 3 0  CDL 505 C 18 1.62 1.90 125.5 -1.40 -0.37 16.7 82 7 7 7 9 3 5 0  CDL 505 C 19 1.68 1.82 125.8 -1.02 -0.34 16.5 80 6 8 4 9 3 4 0  CDL 505 C 20 1.81 1.96 172.1 -1.64 -0.24 20.3 77 15 9 13 14 9 3 0  CDL 505 C LMT 506 C LMT 506 N 21 2.20 3.42 178.4 0.59 0.37 8.6 82 8 5 10 41 7 3 0  CDL 3001 A CDL 3002 A PTY 504 C CDL 505 C LMT 506 C PTY 401 E PC1 201 I LMT 102 J LMT 506 N 22 1.23 1.48 203.8 -0.74 -0.03 14.4 80 14 10 16 27 12 1 0  LMT 506 C CDL 3001 L CDL 3002 L PTY 504 N LMT 506 N LMT 302 P PTY 303 P PC1 201 T 23 1.80 1.93 210.3 -0.85 -0.07 16.1 80 17 11 14 30 9 2 0  LMT 506 C CDL 3001 L CDL 3002 L PTY 504 N LMT 506 N LMT 302 P PTY 303 P PC1 201 T 24 1.80 1.95 248.6 -1.67 -0.26 20.8 79 23 12 12 15 14 4 0  PC1 503 N CDL 701 S CDL 702 S 25 2.40 2.49 244.6 -1.52 -0.23 21.6 80 23 11 8 15 6 5 0  CDL 505 C PC1 503 N CDL 701 S CDL 702 S 26 1.79 1.95 265.1 -0.19 0.12 12.3 80 14 10 16 47 13 4 0  CDL 3001 A CDL 3002 A PTY 504 C LMT 506 C PTY 401 E PC1 201 I LMT 102 J LMT 506 N 27 1.77 2.02 279.6 -1.07 -0.14 16.8 79 22 12 12 19 13 7 1  PC1 503 C CDL 701 H CDL 702 H 28 1.19 2.11 288.1 -1.38 -0.26 18.7 79 22 17 17 16 17 6 0  PC1 503 N HEC 401 O CDL 701 S CDL 702 S Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.