PDBsum entry 8abf Go to PDB code:  Tunnel analysis for: 8abf calculated with MOLE 2.0 PDB id 8abf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.26 20.7 -1.07 -0.42 12.6 82 2 1 1 2 2 1 0   2 1.15 1.22 24.6 -0.82 -0.28 11.6 75 2 1 1 2 5 1 0   3 1.03 1.39 23.9 -0.81 -0.32 10.8 77 2 1 1 2 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.