PDBsum entry 7y1c Go to PDB code:  Pore analysis for: 7y1c calculated with MOLE 2.0 PDB id 7y1c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.29 2.53 28.0 -2.77 -0.64 28.2 84 4 5 3 2 0 1 0   2 2.12 3.20 30.2 -1.02 -0.36 17.6 90 4 3 4 3 0 0 0   3 1.93 1.92 36.9 -1.77 -0.47 19.1 77 4 4 2 3 0 1 0   4 1.88 2.06 39.1 -1.62 -0.49 18.1 88 2 5 7 3 1 0 0   5 1.36 1.58 47.9 -1.90 -0.56 17.0 89 4 4 10 3 2 1 0   6 1.35 1.60 48.9 -1.77 -0.45 15.0 84 4 4 8 4 4 1 0   7 2.11 3.25 52.5 -1.53 -0.36 23.2 84 6 7 5 6 0 1 0   8 1.90 2.21 53.7 -1.93 -0.48 21.7 90 3 5 7 2 1 0 0   9 1.89 2.21 57.4 -1.43 -0.40 19.1 84 6 6 7 3 2 1 0   10 1.72 1.74 61.1 -1.93 -0.61 18.5 89 2 7 6 5 1 0 0   11 1.32 1.92 63.7 -0.93 -0.25 13.2 81 3 5 5 6 3 2 1   12 2.34 2.59 64.4 -1.56 -0.46 19.8 85 7 7 9 4 2 1 0   13 1.36 2.35 70.4 -0.97 -0.30 14.7 80 5 7 7 5 4 2 1   14 1.31 2.29 71.4 -1.16 -0.30 15.3 80 4 7 7 7 4 2 1   15 1.51 1.48 75.3 -1.02 -0.46 13.4 83 4 7 9 7 4 1 0   16 1.95 1.94 79.7 -1.96 -0.45 25.5 80 10 10 6 6 1 2 0   17 1.34 1.52 81.2 -1.70 -0.56 16.8 86 9 8 12 4 4 2 0   18 1.52 1.49 97.8 -1.18 -0.38 16.2 85 6 10 11 8 5 1 0   19 1.57 1.72 100.0 -1.45 -0.56 19.3 84 8 10 10 8 1 0 0   20 1.71 1.89 30.5 -1.34 -0.56 19.1 89 1 5 3 4 0 0 0   21 1.47 1.47 30.5 -1.30 -0.48 13.3 89 2 4 5 4 0 0 0   22 1.16 1.33 50.9 -0.71 -0.30 21.4 76 5 5 1 8 0 0 0   23 1.15 2.56 53.1 -0.14 -0.11 17.4 76 5 4 1 12 0 2 0   24 1.19 1.17 58.0 -1.28 -0.21 16.4 79 5 3 5 8 4 1 0   25 1.10 2.54 64.1 -1.18 -0.18 18.0 72 2 4 1 5 1 2 0   26 2.08 2.95 70.4 -1.47 -0.33 20.6 80 4 7 2 4 1 2 0   27 1.35 1.35 26.3 -2.64 -0.40 28.8 76 6 2 1 0 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.