PDBsum entry 7y1c Go to PDB code:  Tunnel analysis for: 7y1c calculated with MOLE 2.0 PDB id 7y1c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.39 38.5 -0.27 0.18 7.5 82 1 1 2 7 3 0 0   2 1.16 1.45 41.7 -0.61 -0.26 20.3 79 4 4 2 8 0 0 0   3 1.15 1.41 49.7 -0.57 -0.13 17.4 76 4 4 3 9 1 3 0   4 1.78 1.82 15.5 1.89 0.71 6.7 83 1 1 2 5 1 0 0   5 1.33 1.56 15.9 0.41 0.21 12.1 80 1 2 1 6 2 0 0   6 1.33 1.58 16.2 1.50 0.42 9.3 82 1 1 1 9 1 0 0   7 1.11 1.40 23.1 0.83 0.20 8.0 81 1 2 2 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.