PDBsum entry 7wpf Go to PDB code:  Pore analysis for: 7wpf calculated with MOLE 2.0 PDB id 7wpf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 42 pores, coloured by radius 42 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 2.01 36.7 -0.61 0.01 13.5 74 4 0 4 2 2 2 0   2 1.29 1.29 43.4 -1.26 -0.37 17.9 77 9 5 3 2 4 1 0   3 2.78 3.03 43.4 -1.03 -0.45 14.4 80 1 2 3 4 0 3 0   4 2.20 2.99 54.1 -1.34 -0.32 17.7 83 5 5 9 9 2 1 0   5 2.61 4.04 60.7 -1.10 -0.37 17.8 83 6 3 6 5 3 1 0   6 2.59 3.97 61.4 -2.02 -0.48 23.6 80 5 7 4 2 2 3 0   7 1.20 2.02 62.6 -1.01 -0.50 11.6 87 4 2 8 6 1 0 2   8 3.26 3.60 63.4 -1.80 -0.54 18.7 86 7 4 9 4 0 2 0   9 1.19 2.00 68.9 -1.01 -0.47 17.7 84 4 3 3 6 2 2 0   10 1.87 2.22 78.6 -1.89 -0.50 21.9 85 7 6 9 5 3 1 0   11 1.23 2.00 88.6 -1.14 -0.48 15.3 83 6 5 8 5 3 1 2   12 1.95 3.10 86.7 -1.14 -0.36 8.4 81 5 1 8 4 4 3 0  NAG 1311 A 13 1.67 2.03 89.7 -0.66 -0.25 12.5 83 5 3 7 9 2 3 0   14 1.22 1.99 101.5 -0.90 -0.32 17.7 85 6 8 8 6 4 2 2   15 1.63 2.00 111.5 -1.54 -0.44 22.1 86 8 7 8 10 2 3 0   16 1.79 2.13 113.5 -1.51 -0.50 18.2 84 9 8 10 3 5 3 2   17 1.25 1.98 114.5 -0.75 -0.35 13.1 85 5 12 12 13 5 1 0   18 1.62 2.00 128.3 -0.88 -0.34 14.7 83 8 11 12 18 4 2 0   19 2.09 2.87 127.8 -1.28 -0.43 17.4 85 10 14 15 15 4 1 0   20 3.27 3.59 132.9 -1.30 -0.48 13.8 86 9 5 14 9 1 2 0  NAG 1302 A NAG 1311 A 21 3.58 3.86 137.9 -1.65 -0.55 16.2 85 7 8 9 6 1 3 0  NAG 1302 A NAG 1311 A 22 1.72 2.15 140.0 -1.69 -0.52 18.6 83 9 11 12 5 4 4 0   23 1.31 2.01 150.8 -1.20 -0.50 14.8 89 8 9 17 8 4 4 0   24 1.21 1.82 153.5 -1.15 -0.42 16.2 86 10 12 12 14 7 4 0   25 1.54 1.94 161.5 -1.26 -0.44 17.0 88 11 8 14 12 3 5 0   26 1.21 1.73 166.9 -1.61 -0.49 20.0 85 16 14 14 15 6 4 0   27 1.41 3.32 35.2 0.69 -0.01 3.5 92 2 0 7 5 3 0 0   28 1.50 1.55 54.0 -0.15 -0.15 13.7 78 3 4 3 9 2 1 0   29 1.79 2.12 57.7 -1.69 -0.44 16.6 79 4 3 5 1 2 1 0   30 1.72 4.14 66.6 -2.82 -0.62 33.5 85 6 5 8 0 1 1 0   31 1.20 1.32 90.6 -0.64 -0.12 17.5 71 5 7 4 9 7 1 0   32 1.33 2.43 90.0 -1.73 -0.50 23.7 89 8 7 11 2 3 2 0   33 1.43 3.30 92.5 -1.50 -0.44 19.3 87 7 4 13 4 3 1 0   34 1.74 4.31 98.6 -2.44 -0.62 27.1 86 7 7 8 0 1 1 0   35 1.20 1.21 131.7 -1.04 -0.36 15.7 86 8 5 12 8 5 3 0   36 1.49 1.55 131.7 -1.19 -0.46 17.2 85 6 8 12 10 3 1 0   37 1.35 2.56 157.6 -1.91 -0.40 23.5 81 10 8 15 2 7 4 0   38 1.20 1.21 172.3 -0.81 -0.21 13.2 85 5 5 9 11 3 2 0   39 1.59 1.59 25.8 0.45 0.10 13.8 82 2 3 1 9 1 0 0   40 1.21 1.34 29.3 0.39 -0.11 7.6 88 2 2 2 5 1 0 1   41 1.36 1.72 30.8 -0.33 0.04 13.0 87 2 1 4 2 3 0 0   42 1.48 1.67 57.0 -0.23 -0.11 11.4 80 3 5 1 12 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.