 |
PDBsum entry 7v0c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7v0c calculated with MOLE 2.0
|
PDB id
|
|
|
|
7v0c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 tunnels,
coloured by tunnel radius |
 |
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.37 |
1.37 |
34.4 |
-1.63 |
-0.34 |
25.9 |
85 |
 |
7 |
1 |
1 |
1 |
0 |
0 |
0 |
 |
DA 15 E DG 16 E DA 17 E DA 1 F DG 5 F DT 6 F
|
 |
 |
2 |
 |
1.36 |
1.36 |
57.3 |
-1.59 |
-0.55 |
18.2 |
84 |
4 |
3 |
4 |
1 |
2 |
0 |
0 |
DG 5 E DA 13 E DC 14 E DG 5 F DT 6 F DA 7 F DC 8 F DA 9 F DT 10 F DG 11 F DC 14 J DA 15 J
|
 |
3 |
 |
1.37 |
1.37 |
62.8 |
-1.37 |
-0.45 |
15.2 |
82 |
4 |
3 |
5 |
2 |
2 |
0 |
0 |
DA 7 E DC 8 E DA 13 E DC 14 E DG 5 F DT 6 F DA 7 F DC 8 F DA 9 F DT 10 F
|
 |
4 |
 |
1.37 |
1.37 |
100.6 |
-1.72 |
-0.49 |
18.0 |
81 |
11 |
3 |
7 |
3 |
4 |
1 |
0 |
DA 13 E DC 14 E DG 5 F DT 6 F DA 7 F DC 8 F DA 9 F DT 10 F DA 9 I DT 10 I DG 11 I DT 12 I DT 2 J DC 3 J DT 10 J DG 11 J DT 12 J DA 13 J DC 14 J
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |