PDBsum entry 7qkd Go to PDB code:  Pore analysis for: 7qkd calculated with MOLE 2.0 PDB id 7qkd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.73 38.3 -1.33 -0.41 14.7 82 4 3 5 2 5 0 0   2 2.22 2.22 41.3 -1.93 -0.78 20.9 79 4 8 5 1 3 1 0   3 2.17 2.19 48.4 -2.52 -0.67 20.6 77 8 9 5 1 3 2 0   4 1.57 1.74 57.2 -1.76 -0.69 17.5 85 6 8 7 3 2 1 0   5 2.17 2.18 60.6 -2.00 -0.69 19.0 74 6 10 5 0 6 2 0   6 2.17 2.22 61.9 -0.82 -0.25 16.4 75 7 7 2 3 3 1 0   7 1.60 1.73 66.8 -1.93 -0.65 17.5 80 7 9 7 2 4 2 0   8 2.18 2.30 72.7 -1.53 -0.41 19.6 76 8 10 5 4 4 2 0   9 2.15 2.23 92.6 -1.17 -0.45 18.2 75 6 11 5 5 7 2 0   10 1.59 1.75 100.7 -1.28 -0.47 16.3 79 8 11 7 5 6 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.