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PDBsum entry 7omf
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Tunnel analysis for: 7omf calculated with  MOLE 2.0
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PDB id
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7omf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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10 tunnels,
coloured by
tunnel radius
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10 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.46 |
1.46 |
59.1 |
-1.28 |
-0.28 |
19.1 |
85 |
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9 |
1 |
6 |
3 |
3 |
0 |
0 |
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2 |
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1.23 |
1.43 |
20.9 |
2.03 |
0.60 |
2.3 |
72 |
1 |
0 |
0 |
10 |
3 |
0 |
1 |
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3 |
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1.42 |
1.59 |
17.6 |
0.63 |
0.46 |
7.2 |
85 |
2 |
0 |
0 |
4 |
1 |
1 |
0 |
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4 |
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1.17 |
3.45 |
17.5 |
0.22 |
0.56 |
10.3 |
72 |
2 |
0 |
1 |
5 |
2 |
0 |
0 |
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5 |
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1.24 |
1.91 |
16.1 |
0.12 |
0.23 |
18.8 |
83 |
4 |
1 |
0 |
3 |
0 |
0 |
0 |
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6 |
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1.25 |
1.95 |
17.9 |
0.77 |
0.41 |
14.5 |
85 |
3 |
1 |
0 |
3 |
0 |
0 |
0 |
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7 |
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1.14 |
1.27 |
18.5 |
-0.40 |
-0.20 |
17.4 |
83 |
3 |
1 |
0 |
2 |
0 |
0 |
0 |
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8 |
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1.12 |
1.25 |
20.3 |
0.34 |
0.00 |
11.1 |
83 |
3 |
1 |
0 |
2 |
0 |
0 |
0 |
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9 |
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1.58 |
1.58 |
15.9 |
0.28 |
-0.16 |
11.6 |
74 |
2 |
3 |
2 |
7 |
0 |
0 |
0 |
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10 |
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1.08 |
2.58 |
15.5 |
0.44 |
0.38 |
12.1 |
71 |
1 |
1 |
0 |
4 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program