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PDBsum entry 7lm2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7lm2 calculated with MOLE 2.0 PDB id
7lm2
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.55 2.63 27.4 -1.64 -0.38 17.2 83 4 4 4 1 1 0 0  
2 3.15 3.22 46.7 -1.83 -0.45 22.4 85 6 6 5 2 3 0 0  Y5Y 1101 A
3 1.31 1.37 49.5 -1.53 -0.41 17.7 86 9 2 5 3 1 1 0  
4 3.16 3.27 54.0 -2.05 -0.41 26.8 84 8 6 3 3 2 0 0  Y5Y 1101 A
5 1.97 2.18 56.5 -2.05 -0.50 19.3 85 6 6 8 2 2 2 0  
6 1.27 1.33 77.1 -1.90 -0.43 29.7 84 8 6 3 5 0 0 0  
7 1.97 2.17 87.0 -1.32 -0.33 15.8 83 8 6 10 5 3 1 1  
8 1.27 1.35 96.8 -2.27 -0.48 29.1 82 12 8 6 5 1 0 0  
9 1.18 1.72 110.0 -2.29 -0.47 25.2 81 16 10 12 4 2 4 0  SO4 1103 A
10 1.28 1.65 125.0 -2.36 -0.50 28.0 83 18 13 15 4 1 4 0  SO4 1103 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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