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PDBsum entry 7hlc

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Ligase PDB id
7hlc

 

 

 

 

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Contents
Protein chain
185 a.a.
Ligands
EDO ×2
UWS
SO4
Waters ×140
PDB id:
7hlc
Name: Ligase
Title: Pandda analysis group deposition -- crystal structure of trim21 in complex with z1079512010
Structure: E3 ubiquitin-protein ligase trim21. Chain: b. Synonym: 52 kda ro protein,52 kda ribonucleoprotein autoantigen ro/ss-a,ro(ss-a),sjoegren syndrome type a antigen,ss-a,tripartite motif-containing protein 21. Engineered: yes
Source: Mus musculus. House mouse. Organism_taxid: 10090. Gene: trim21, ro52, ssa1. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.35Å     R-factor:   0.184     R-free:   0.207
Authors: Y.Kim,P.Marples,D.Fearon,F.Von Delft,S.Knapp,A.Kraemer,Structural Genomics Consortium (Sgc)
Key ref: Y.Kim et al. Pandda analysis group deposition. To be published, .
Date:
04-Nov-24     Release date:   27-Nov-24    
PROCHECK
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 Headers
 References

Protein chain
Q62191  (RO52_MOUSE) -  E3 ubiquitin-protein ligase TRIM21 from Mus musculus
Seq:
Struc:
470 a.a.
185 a.a.*
Key:    Secondary structure
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

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