PDBsum entry 7gpb Go to PDB code:  Pore analysis for: 7gpb calculated with MOLE 2.0 PDB id 7gpb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.21 2.21 35.5 -1.42 -0.46 18.7 81 3 4 1 1 1 1 0   2 1.82 2.22 38.0 -2.77 -0.67 30.9 80 6 4 1 0 0 1 0   3 2.98 4.21 44.7 -1.42 -0.18 27.8 82 7 5 1 4 1 0 0   4 2.96 4.22 53.1 -2.98 -0.40 39.0 82 10 8 1 1 1 1 0   5 3.70 3.89 53.5 -1.66 -0.43 29.2 78 8 7 0 3 1 1 0   6 1.47 1.74 53.9 -2.29 -0.30 28.6 83 8 6 2 3 2 1 0   7 3.36 4.37 54.7 -3.07 -0.47 40.2 76 10 11 0 0 2 2 0   8 2.19 2.40 68.5 -1.08 -0.28 20.4 74 8 5 1 3 3 0 1   9 2.70 3.08 71.3 -1.80 -0.41 28.8 73 10 8 1 3 3 1 1   10 1.71 1.71 82.9 -1.68 -0.28 26.3 78 10 8 2 7 3 2 0   11 1.54 3.47 85.4 -2.26 -0.41 31.3 77 10 11 3 5 4 1 0   12 1.51 3.16 89.8 -1.55 -0.31 27.6 77 11 10 0 6 2 1 0   13 1.67 1.67 96.9 -1.34 -0.26 26.8 79 13 9 0 5 2 1 0   14 1.44 1.74 98.9 -1.63 -0.28 25.0 80 11 9 2 7 3 2 0   15 1.56 1.77 109.8 -2.31 -0.35 29.7 80 14 12 2 3 3 3 0   16 1.67 1.67 111.1 -1.35 -0.36 25.0 78 13 12 0 5 3 1 0   17 1.75 1.75 112.6 -1.68 -0.41 23.0 81 9 10 3 5 2 1 0   18 2.60 2.63 112.1 -1.94 -0.47 25.4 79 11 12 3 4 3 2 0   19 1.66 1.66 112.6 -1.06 -0.27 21.5 79 14 7 0 5 3 0 0   20 1.72 1.72 114.4 -0.65 -0.20 19.6 75 10 9 1 7 3 0 1   21 2.57 2.73 120.4 -2.03 -0.51 25.7 79 11 13 4 4 4 1 0   22 1.75 1.75 120.9 -1.81 -0.47 23.6 81 9 11 4 5 3 0 0   23 1.58 3.15 120.5 -1.87 -0.34 32.2 79 12 16 1 6 2 2 0   24 2.58 2.63 123.6 -1.86 -0.52 23.8 78 11 15 3 3 4 2 0   25 2.57 2.73 131.9 -1.94 -0.55 24.3 78 11 16 4 3 5 1 0   26 1.57 3.12 135.0 -1.84 -0.44 29.8 77 12 18 0 5 3 2 0   27 1.49 3.12 137.7 -2.07 -0.46 27.4 79 12 16 3 6 3 2 0   28 1.59 3.16 139.5 -1.11 -0.27 24.0 75 12 15 1 8 4 1 1   29 1.48 3.23 146.0 -2.11 -0.50 27.6 79 12 17 4 6 4 1 0   30 1.45 1.78 191.1 -1.68 -0.48 21.2 79 16 15 5 5 7 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.