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PDBsum entry 7gpb

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 7gpb calculated with MOLE 2.0 PDB id
7gpb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.04 2.26 23.6 1.59 0.30 6.1 79 1 1 0 9 1 0 1  
2 1.16 3.52 17.0 -3.00 -0.52 43.5 75 4 3 0 1 1 0 0  
3 1.69 1.83 17.6 0.77 0.27 16.6 81 3 2 1 4 0 0 0  
4 1.60 1.82 18.2 0.74 0.18 14.7 81 3 2 1 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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