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PDBsum entry 7duq

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7duq calculated with MOLE 2.0 PDB id
7duq
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 2.98 36.2 -0.66 -0.02 19.5 74 5 2 1 4 3 0 1  
2 1.43 3.00 37.5 -1.10 -0.06 21.5 76 5 3 2 5 3 0 1  
3 1.57 1.57 38.5 -1.81 -0.27 25.1 83 7 3 3 2 2 0 0  
4 1.28 2.97 66.3 -1.33 -0.40 18.5 82 9 4 6 5 2 1 2  
5 1.48 2.74 100.4 -2.00 -0.67 17.3 84 8 6 12 3 1 0 1  
6 1.96 2.53 152.5 -1.57 -0.41 16.2 85 10 5 14 7 2 1 0  
7 1.63 1.70 180.6 -1.53 -0.38 18.0 83 16 8 14 9 3 1 1  
8 1.36 1.51 191.6 -1.33 -0.38 17.7 85 18 7 13 10 3 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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