PDBsum entry 7dkc Go to PDB code:  Tunnel analysis for: 7dkc calculated with MOLE 2.0 PDB id 7dkc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.22 42.7 -1.31 -0.34 15.8 87 4 3 5 4 2 1 0  TYR 801 A TYR 802 A 2 1.37 2.76 53.7 -0.92 -0.37 12.9 89 6 1 5 3 2 0 0  TYR 801 A TYR 802 A GOL 806 A 3 1.83 1.96 56.9 -1.10 -0.33 12.6 87 5 1 8 4 3 0 0  TYR 801 A TYR 802 A 4 1.33 1.37 62.0 -1.12 -0.38 13.8 86 5 3 8 4 3 0 0  TYR 801 A TYR 802 A 5 1.39 1.39 68.6 -0.91 -0.31 14.2 84 6 2 6 9 2 1 0  TYR 801 A TYR 802 A 6 1.34 1.77 69.0 -1.28 -0.30 16.2 85 7 3 8 6 3 0 0  TYR 801 A TYR 802 A 7 1.62 1.62 73.3 -1.05 -0.37 13.4 89 5 3 9 6 2 0 0  TYR 801 A TYR 802 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.