PDBsum entry 6vmf Go to PDB code:  Pore analysis for: 6vmf calculated with MOLE 2.0 PDB id 6vmf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 2.33 25.4 2.06 0.60 1.2 85 0 0 4 8 1 0 0   2 1.27 1.47 42.9 -0.85 -0.40 10.9 80 2 3 5 4 3 1 0   3 3.83 4.04 51.9 -2.21 -0.62 18.2 83 4 4 6 3 0 3 0   4 3.55 5.06 52.6 -1.62 -0.57 19.3 86 3 4 7 5 1 3 0   5 3.24 3.30 69.0 -1.56 -0.37 19.2 84 9 2 8 5 0 5 0   6 1.91 1.91 93.4 -1.92 -0.76 15.3 89 6 8 16 2 0 4 0   7 1.90 1.94 99.1 -2.05 -0.75 18.4 92 6 8 16 3 0 2 0   8 1.14 1.16 108.6 -0.21 -0.02 12.5 83 6 5 8 17 1 2 0   9 1.92 1.96 108.4 -2.19 -0.83 18.4 90 5 12 17 4 1 3 0   10 1.88 1.88 163.6 -1.94 -0.77 17.9 88 6 14 19 8 0 7 0   11 1.93 2.09 164.5 -1.78 -0.69 16.6 89 6 11 18 9 1 5 0   12 1.18 2.62 165.9 -1.87 -0.64 16.9 85 10 11 17 7 3 7 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.