PDBsum entry 6vjs Go to PDB code:  Tunnel analysis for: 6vjs calculated with MOLE 2.0 PDB id 6vjs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.19 25.9 1.80 0.41 5.6 83 2 1 1 8 0 0 0   2 1.58 1.58 17.9 -2.87 -0.69 37.5 76 2 3 1 3 0 0 0   3 1.19 2.00 20.8 2.72 0.78 0.8 80 0 0 2 10 0 0 1   4 1.41 1.71 16.4 -0.99 -0.34 21.6 76 1 3 1 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.