PDBsum entry 6vjs Go to PDB code:  Pore analysis for: 6vjs calculated with MOLE 2.0 PDB id 6vjs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 2.36 42.7 -0.43 0.05 16.9 80 5 3 1 7 2 1 0   2 1.22 1.27 77.0 -0.46 -0.20 12.1 90 4 4 5 10 0 0 0   3 1.47 3.19 102.4 -0.57 -0.05 18.4 84 6 8 5 12 2 0 1   4 3.96 4.91 108.5 -2.06 -0.43 22.9 86 17 7 13 10 1 4 0   5 1.21 2.58 119.2 -1.13 -0.11 24.7 86 9 10 6 13 2 2 0   6 2.54 2.71 131.4 -2.00 -0.50 22.7 84 20 8 10 10 2 2 0   7 1.86 1.88 149.8 -2.49 -0.57 29.9 82 19 13 13 8 3 4 1   8 1.28 2.57 162.1 -1.78 -0.27 27.6 81 17 18 4 17 4 4 0   9 1.91 1.96 161.5 -2.24 -0.54 27.6 84 19 16 14 13 3 5 1   10 2.68 2.81 164.7 -2.00 -0.57 21.9 85 21 13 16 11 3 3 0   11 2.04 2.09 171.2 -2.31 -0.52 27.8 83 19 12 15 7 4 3 0   12 1.31 2.80 181.8 -1.92 -0.40 27.1 82 19 10 9 12 4 3 0   13 2.12 2.15 182.9 -2.04 -0.49 25.3 85 19 15 16 12 4 4 0   14 1.66 1.78 199.6 -2.01 -0.43 24.3 84 23 22 14 15 4 2 0   15 1.44 3.61 200.8 -2.03 -0.46 24.4 83 25 11 13 12 3 6 0   16 2.65 3.34 238.9 -1.54 -0.32 20.9 82 19 15 14 15 5 6 0   17 1.85 1.84 264.2 -2.21 -0.50 28.4 80 29 19 16 14 6 9 1   18 1.82 1.82 268.4 -1.85 -0.43 25.6 81 18 23 15 15 6 6 1   19 1.32 1.39 270.7 -1.93 -0.44 25.5 82 26 19 16 19 5 5 0   20 1.23 1.92 275.5 -1.98 -0.58 25.3 85 24 21 16 15 3 3 0   21 2.45 2.71 284.9 -1.60 -0.43 20.6 81 22 20 17 15 7 5 0   22 2.09 2.11 285.6 -2.07 -0.45 27.1 81 29 18 18 13 7 8 0   23 2.05 2.07 289.8 -1.62 -0.38 23.5 82 18 22 17 14 7 5 0   24 1.33 1.39 306.8 -1.93 -0.37 26.9 80 30 16 13 20 5 8 0   25 1.61 1.95 321.4 -1.97 -0.44 26.6 81 32 27 14 19 5 3 3   26 1.67 2.82 321.0 -1.59 -0.36 21.8 80 26 17 14 16 7 8 0   27 1.98 2.60 357.9 -2.14 -0.40 29.0 80 31 31 13 20 10 4 2   28 1.90 2.48 359.3 -1.97 -0.38 27.0 80 37 26 16 24 8 8 2   29 1.69 4.01 364.8 -1.89 -0.43 24.5 80 36 26 17 21 9 9 2   30 1.41 3.76 462.5 -1.90 -0.34 27.6 80 45 35 15 28 6 4 2   31 1.37 4.36 34.7 -0.11 0.21 13.4 77 2 3 1 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.