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PDBsum entry 6udb

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6udb calculated with MOLE 2.0 PDB id
6udb
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.25 42.1 -1.65 -0.48 20.2 90 4 1 4 2 1 1 0  DV7 110 A DV7 110 D
2 1.28 1.27 47.0 -0.77 0.05 9.1 71 4 2 4 4 4 1 0  DV7 110 B DV7 110 C PEG 201 C
3 1.16 1.25 60.6 -1.23 -0.10 16.2 82 6 3 6 4 4 1 0  DV7 110 D PEG 201 D
4 2.11 2.31 110.6 -1.27 -0.06 15.8 84 7 3 10 7 5 0 0  DV7 110 A DV7 110 D PEG 201 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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