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PDBsum entry 6udb
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Tunnel analysis for: 6udb calculated with  MOLE 2.0
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PDB id
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6udb
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.47 |
19.5 |
-1.29 |
-0.60 |
9.1 |
92 |
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1 |
1 |
4 |
3 |
0 |
0 |
0 |
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2 |
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1.25 |
1.47 |
28.7 |
-0.80 |
-0.22 |
7.0 |
86 |
1 |
1 |
6 |
3 |
2 |
0 |
0 |
PEG 201 D
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3 |
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1.25 |
1.47 |
32.5 |
-1.10 |
-0.15 |
8.5 |
81 |
2 |
1 |
6 |
4 |
4 |
0 |
0 |
DV7 110 D PEG 201 D
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4 |
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1.20 |
1.20 |
15.1 |
-2.20 |
-0.66 |
23.5 |
95 |
2 |
1 |
3 |
1 |
0 |
0 |
0 |
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5 |
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1.20 |
1.39 |
20.4 |
-1.04 |
-0.51 |
16.8 |
91 |
2 |
2 |
1 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program