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PDBsum entry 6twh

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Pore analysis for: 6twh calculated with MOLE 2.0 PDB id
6twh
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.12 3.72 44.6 -0.19 -0.13 7.9 92 2 4 7 6 1 0 0  
2 3.27 3.66 46.4 -1.61 -0.60 17.2 87 3 6 6 3 1 0 0  
3 3.00 3.09 47.4 -1.00 -0.35 10.9 86 3 6 6 4 2 0 0  
4 1.71 1.76 50.3 -1.16 -0.38 18.1 75 5 6 4 3 2 0 0  
5 3.01 3.09 50.9 0.07 -0.15 5.0 96 1 3 9 6 1 0 0  
6 3.38 3.99 51.5 -0.16 -0.20 7.2 96 1 3 10 6 1 0 0  
7 3.01 3.09 52.3 -1.21 -0.49 11.4 90 1 5 9 3 2 0 0  
8 3.67 4.47 49.1 -0.44 -0.12 5.5 96 0 3 12 6 2 0 0  
9 3.71 4.47 55.6 -0.68 -0.17 5.0 96 1 3 12 5 2 0 0  
10 1.63 2.54 71.2 -2.24 -0.69 21.7 85 4 4 5 2 2 1 0  NAG 201 F
11 2.00 2.30 80.9 -2.32 -0.65 18.7 88 6 6 9 2 2 1 0  NAG 1 G NAG 2 G
12 1.82 2.47 81.6 -2.38 -0.71 21.2 86 6 6 5 2 2 1 0  NAG 201 F
13 2.00 2.33 102.6 -1.35 -0.42 11.9 91 5 6 15 4 3 1 0  NAG 1 G NAG 2 G
14 1.99 2.35 106.4 -2.17 -0.59 17.2 88 5 9 12 3 3 1 0  NAG 1 G NAG 2 G
15 1.68 2.42 113.4 -1.20 -0.37 12.4 91 6 6 14 6 3 1 0  NAG 201 F
16 1.62 2.42 116.0 -2.01 -0.54 17.6 87 6 9 10 4 3 1 0  NAG 201 F
17 1.84 1.86 45.7 -0.90 -0.34 19.8 77 5 7 3 5 2 0 0  
18 1.85 1.86 67.4 -1.42 -0.44 21.5 76 6 7 3 3 2 0 0  
19 1.86 1.88 68.3 -1.30 -0.42 20.1 76 6 7 3 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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