PDBsum entry 6pf5 Go to PDB code:  Tunnel analysis for: 6pf5 calculated with MOLE 2.0 PDB id 6pf5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 3.58 28.6 0.25 0.51 8.6 69 1 1 2 5 6 0 0  UMP 600 A OED 601 A 2 1.40 3.60 34.4 -1.31 0.11 19.3 70 5 4 3 3 6 0 1  UMP 600 A OED 601 A 3 1.41 3.58 38.1 -0.50 0.30 12.1 69 2 2 4 5 6 0 1  UMP 600 A OED 601 A 4 1.40 3.54 21.7 0.15 0.59 10.0 64 1 1 2 4 6 0 0  OED 601 D 5 1.42 3.55 31.7 -0.26 0.37 10.7 68 2 2 3 6 6 0 1  UMP 600 D OED 601 D 6 1.39 3.54 44.6 -1.39 0.12 21.2 69 5 4 3 3 7 0 1  UMP 600 D OED 601 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.