spacer
spacer

PDBsum entry 6ld4

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 6ld4 calculated with MOLE 2.0 PDB id
6ld4
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.16 3.36 29.6 -0.89 0.01 15.6 83 4 4 2 3 3 0 0  G8O 903 A G8F 904 A
2 3.16 3.36 29.7 -1.46 -0.21 18.8 83 4 4 2 1 2 0 0  G8O 903 A G8F 904 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer