PDBsum entry 6ld4 Go to PDB code:  Tunnel analysis for: 6ld4 calculated with MOLE 2.0 PDB id 6ld4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.51 29.9 -0.75 -0.38 14.9 90 3 3 3 5 1 1 0   2 1.24 1.49 30.5 -0.63 -0.35 10.7 88 1 2 4 4 1 2 0   3 1.26 1.50 48.0 -0.38 -0.30 12.0 90 5 2 3 5 1 1 0   4 1.26 1.36 15.6 -0.53 0.02 15.1 75 2 1 0 4 1 0 0   5 1.43 1.46 16.0 -0.86 0.04 19.6 77 2 1 0 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.