PDBsum entry 6fdh Go to PDB code:  Tunnel analysis for: 6fdh calculated with MOLE 2.0 PDB id 6fdh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.38 26.7 0.05 -0.15 12.1 80 3 2 0 4 3 0 0   2 1.22 1.91 32.8 -0.53 -0.15 12.2 81 4 1 1 3 3 0 0  CL 203 B CL 208 B 3 1.23 1.81 35.0 -0.98 -0.29 15.8 83 3 2 2 3 3 0 0  CL 201 A CL 208 B 4 1.38 1.85 38.8 -0.80 -0.35 19.6 83 3 5 1 6 2 0 0  CL 203 A CL 208 B 5 1.18 1.18 42.1 0.17 -0.04 11.4 80 4 2 1 4 4 0 0  CL 203 A CL 208 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.