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PDBsum entry 6f7c

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6f7c calculated with MOLE 2.0 PDB id
6f7c
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.37 54.9 -2.51 -0.53 32.9 81 8 6 1 3 0 2 0  
2 1.16 2.33 80.9 -1.66 -0.49 16.6 83 7 5 6 6 0 4 0  
3 1.83 1.83 92.8 -2.89 -0.69 37.4 81 7 9 1 2 1 1 0  
4 1.46 2.44 105.3 -1.44 -0.34 23.5 86 9 5 6 8 0 0 0  
5 1.86 1.85 111.4 -2.25 -0.55 28.6 81 9 9 3 3 3 1 0  
6 1.27 1.38 111.8 -2.52 -0.66 33.9 81 9 9 2 3 1 1 0  
7 1.15 2.16 141.7 -1.93 -0.43 23.3 83 16 11 6 9 2 4 0  ACP 401 F
8 1.22 2.33 142.2 -2.07 -0.46 26.2 84 15 9 5 8 0 4 0  
9 1.16 2.27 167.5 -2.01 -0.50 25.4 83 13 11 6 7 1 3 0  
10 2.80 3.32 29.8 -2.52 -0.46 31.9 77 4 5 2 0 2 1 0  
11 1.41 1.58 102.3 -2.20 -0.36 33.4 81 15 13 1 8 1 1 0  
12 2.36 2.36 46.5 -1.60 -0.65 13.3 83 2 4 4 3 0 2 0  
13 2.84 3.52 25.3 -2.51 -0.55 31.4 79 7 6 1 1 1 1 0  MES 504 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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