PDBsum entry 6baf Go to PDB code:  Tunnel analysis for: 6baf calculated with MOLE 2.0 PDB id 6baf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.28 21.1 0.46 0.56 5.1 76 1 1 1 3 5 0 0  BLR 401 A 2 1.16 1.25 47.7 -0.30 0.14 12.6 78 5 3 4 7 6 0 0  BLR 401 A 3 1.18 1.33 52.8 -0.10 0.20 14.1 79 6 2 3 7 5 1 0  BLR 401 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.