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PDBsum entry 6b9f

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6b9f calculated with MOLE 2.0 PDB id
6b9f
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 2.13 31.7 -0.95 -0.40 13.7 77 2 4 2 2 4 0 0  GDP 506 B
2 1.24 2.14 82.9 -1.56 -0.47 16.4 84 5 10 13 7 4 1 0  GDP 506 A
3 1.61 1.58 184.0 -2.26 -0.55 28.1 81 11 10 9 3 5 1 0  GDP 506 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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