PDBsum entry 6b9f Go to PDB code:  Tunnel analysis for: 6b9f calculated with MOLE 2.0 PDB id 6b9f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 2.35 39.9 -1.51 -0.43 16.6 83 4 3 6 2 3 0 0   2 1.27 2.41 41.9 -1.37 -0.47 11.4 82 2 4 7 2 4 0 0   3 1.22 2.02 47.3 -1.44 -0.43 14.2 80 4 3 6 2 6 0 0  GDP 506 A 4 1.34 1.58 52.4 -1.61 -0.49 20.0 82 2 7 9 6 5 0 0   5 1.05 1.91 52.6 -1.78 -0.47 17.0 84 6 7 7 3 5 0 0  GDP 506 B 6 1.19 1.92 56.5 -1.55 -0.35 17.2 82 5 6 6 3 5 1 0  GDP 506 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.