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PDBsum entry 6b0b

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 6b0b calculated with MOLE 2.0 PDB id
6b0b
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.28 83.9 -0.82 -0.28 16.5 81 8 3 3 6 2 0 0  U 0 F A 1 F A 2 F A 3 F
2 1.30 1.43 153.9 -1.90 -0.27 22.1 71 16 2 3 2 3 3 1  A 2 B A 3 B U 1 C U 2 C A 1 F A 2 F A 3 F
3 1.24 1.23 173.5 -0.94 -0.14 15.4 74 15 3 6 8 5 3 1  A 2 B A 3 B U 1 C U 2 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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