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PDBsum entry 6b0b

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6b0b calculated with MOLE 2.0 PDB id
6b0b
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 2.76 50.2 0.60 0.54 6.0 74 3 0 3 10 7 1 0  
2 1.23 1.72 53.2 0.34 0.52 6.5 73 3 0 3 10 8 1 0  
3 1.19 1.49 62.3 0.29 0.25 7.9 78 3 1 6 12 6 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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