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PDBsum entry 6aoc
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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6aoc calculated with MOLE 2.0 PDB id
6aoc
Tunnels calculated on whole structure Tunnels calculated excluding ligands
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1 tunnel, coloured by tunnel radius 13 tunnels, coloured by tunnel radius 13 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.44 39.7 -0.56 -0.29 11.1 83 5 2 2 6 1 1 0  EDO 609 A
2 1.29 1.44 43.4 -0.46 -0.29 9.1 82 3 3 1 4 1 1 0  EDO 521 B EDO 523 B
3 1.31 1.43 46.9 -0.84 -0.31 13.7 82 4 3 4 5 1 1 0  EDO 609 A
4 1.28 1.42 60.7 -1.49 -0.19 23.0 77 7 7 1 5 3 1 0  EDO 609 A
5 1.28 1.42 64.3 -1.11 -0.29 14.7 81 8 4 5 5 0 2 0  EDO 609 A
6 1.33 1.43 72.8 -0.83 -0.35 11.6 82 6 4 7 7 1 4 0  EDO 609 A
7 1.30 1.43 73.6 -1.46 -0.31 21.7 83 13 6 5 5 0 1 0  EDO 609 A
8 1.30 1.43 73.7 -1.09 -0.27 17.7 84 9 5 5 6 0 2 0  EDO 609 A
9 1.28 1.44 74.0 -1.08 -0.33 18.4 80 6 6 3 5 1 2 0  EDO 609 A
10 1.29 1.44 81.9 -0.91 -0.16 14.4 85 8 3 6 11 2 3 0  ZW2 603 A EDO 609 A
11 1.22 1.23 96.9 -1.12 -0.29 17.2 79 7 9 4 9 6 3 0  EDO 609 A EDO 618 C
12 1.13 1.31 98.4 -0.91 -0.26 13.1 81 9 3 9 11 3 1 0  EDO 609 A
13 1.09 3.26 28.3 1.70 0.71 12.0 85 2 2 2 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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