PDBsum entry 5y9c Go to PDB code:  Pore analysis for: 5y9c calculated with MOLE 2.0 PDB id 5y9c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.34 3.35 69.5 -1.83 -0.32 25.3 86 15 6 9 2 5 2 0   2 1.60 2.66 131.5 -1.75 -0.37 18.5 78 8 7 6 3 5 4 0   3 2.40 3.93 144.6 -2.13 -0.67 20.6 83 9 8 12 1 2 8 0   4 1.64 2.67 144.6 -1.75 -0.54 15.6 87 7 5 16 2 4 5 0   5 2.38 3.92 147.8 -2.09 -0.35 26.9 83 18 10 11 1 7 6 0   6 1.62 2.68 147.8 -1.74 -0.24 21.9 86 16 7 15 2 9 3 0   7 1.34 2.03 58.6 -1.10 -0.30 18.4 74 5 3 4 4 3 1 0   8 1.87 2.11 70.4 -1.57 -0.40 17.7 76 6 6 6 3 5 3 0   9 1.95 3.06 26.1 -1.14 -0.35 10.6 75 2 2 4 2 4 2 0   10 2.36 2.86 46.3 -2.33 -0.55 22.6 79 3 4 4 1 1 2 0   11 2.00 2.87 69.1 -1.37 -0.37 14.7 74 5 5 6 3 5 3 0   12 1.76 2.76 34.3 -0.67 -0.21 9.4 75 3 1 4 3 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.