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PDBsum entry 5y2c
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Pore analysis for: 5y2c calculated with  MOLE 2.0
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PDB id
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5y2c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.45 |
2.61 |
30.8 |
-1.74 |
-0.26 |
15.3 |
70 |
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9 |
3 |
2 |
2 |
7 |
1 |
0 |
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NAG 1 C NAG 3 C NAG 5 C
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2 |
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1.34 |
1.52 |
37.5 |
-1.82 |
-0.24 |
27.2 |
80 |
9 |
6 |
1 |
6 |
3 |
2 |
0 |
NAG 5 C
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3 |
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1.45 |
2.73 |
39.2 |
-2.68 |
-0.35 |
24.6 |
69 |
3 |
8 |
3 |
2 |
6 |
1 |
0 |
NAG 1 C NAG 3 E
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4 |
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2.64 |
2.88 |
39.5 |
-1.86 |
0.00 |
16.9 |
69 |
10 |
4 |
2 |
2 |
8 |
0 |
0 |
NAG 1 C NAG 3 C NAG 5 C
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5 |
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1.34 |
1.52 |
43.3 |
-1.93 |
-0.39 |
23.6 |
80 |
10 |
6 |
3 |
7 |
2 |
1 |
0 |
NAG 1 C NAG 3 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program