spacer
spacer

PDBsum entry 5sdk

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
5sdk

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
697 a.a.
Ligands
I87 ×2
Metals
_CL ×3
Waters ×265
PDB id:
5sdk
Name: Hydrolase
Title: Pandda analysis group deposition -- crystal structure of porphyromonas gingivalis in complex with z416341642
Structure: Asp/glu-specific dipeptidyl-peptidase. Chain: a, b. Synonym: dipeptidyl-peptidase 11,dpp11. Engineered: yes
Source: Porphyromonas gingivalis. Organism_taxid: 837. Gene: dpp11, pgn_0607. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.98Å     R-factor:   0.219     R-free:   0.239
Authors: C.T.Tham,J.A.Coker,T.Krojer,W.R.Foster,L.Koekemoer,A.Douangamath, R.Talon,D.Fearon,F.Von Delft,W.W.Yue,C.Bountra,G.A.Bezerra
Key ref: C.T.Tham et al. Pandda analysis group deposition. To be published, .
Date:
20-Jan-22     Release date:   09-Feb-22    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
B2RID1  (DPP11_PORG3) -  Asp/Glu-specific dipeptidyl-peptidase from Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
Seq:
Struc:
 
Seq:
Struc:
720 a.a.
697 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.3.4.14.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

spacer

spacer