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PDBsum entry 5odc
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Oxidoreductase
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PDB id
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5odc
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Contents |
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653 a.a.
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291 a.a.
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184 a.a.
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138 a.a.
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298 a.a.
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447 a.a.
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173 a.a.
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Generate full PROCHECK analyses
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PROCHECK summary for 5odc
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 3175 91.7%
Additional allowed regions [a,b,l,p] 267 7.7%
Generously allowed regions [~a,~b,~l,~p] 16 0.5%
Disallowed regions [XX] 5 0.1%*
---- ------
Non-glycine and non-proline residues 3463 100.0%
End-residues (excl. Gly and Pro) 24
Glycine residues 324
Proline residues 200
----
Total number of residues 4011
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.05
Chi1-chi2 distribution -0.01
Chi1 only 0.04
Chi3 & chi4 0.34
Omega 0.45
0.17
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.56
Main-chain bond angles 0.31
0.42
=====
OVERALL AVERAGE 0.27
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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