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PDBsum entry 5mvc
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Pore analysis for: 5mvc calculated with  MOLE 2.0
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PDB id
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5mvc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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0 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.35 |
1.99 |
26.4 |
0.09 |
0.23 |
8.0 |
75 |
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2 |
0 |
1 |
6 |
4 |
1 |
0 |
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Y9B 403 A
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2 |
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1.49 |
1.65 |
27.9 |
-1.86 |
-0.48 |
12.1 |
80 |
5 |
0 |
5 |
0 |
3 |
1 |
0 |
FMN 401 A ORO 402 A
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3 |
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1.52 |
1.67 |
35.4 |
-1.09 |
-0.34 |
10.5 |
91 |
5 |
1 |
5 |
3 |
2 |
0 |
0 |
FMN 401 A
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4 |
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1.67 |
1.67 |
38.8 |
-1.02 |
-0.58 |
6.7 |
88 |
6 |
0 |
6 |
3 |
2 |
1 |
0 |
FMN 401 A ORO 402 A
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5 |
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1.94 |
2.05 |
45.1 |
-0.70 |
-0.31 |
7.2 |
81 |
5 |
0 |
4 |
6 |
4 |
2 |
0 |
FMN 401 A ORO 402 A Y9B 403 A
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6 |
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1.60 |
2.48 |
47.3 |
-0.19 |
-0.24 |
6.0 |
89 |
4 |
1 |
4 |
9 |
3 |
1 |
0 |
FMN 401 A Y9B 403 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program