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PDBsum entry 5mcp
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Pore analysis for: 5mcp calculated with  MOLE 2.0
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PDB id
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5mcp
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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16 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.09 |
1.67 |
49.3 |
-1.04 |
-0.43 |
8.1 |
84 |
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4 |
0 |
5 |
2 |
2 |
1 |
0 |
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ATP 603 H
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2 |
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2.17 |
2.18 |
68.1 |
-1.26 |
-0.44 |
14.9 |
81 |
6 |
1 |
7 |
2 |
3 |
2 |
0 |
ATP 602 D MG 604 D ATP 602 G MG 604 G
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3 |
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2.26 |
2.39 |
83.7 |
0.17 |
0.01 |
5.5 |
80 |
2 |
2 |
3 |
10 |
3 |
2 |
0 |
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4 |
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1.21 |
2.28 |
84.9 |
0.03 |
-0.10 |
11.0 |
86 |
1 |
7 |
4 |
12 |
2 |
2 |
0 |
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5 |
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1.53 |
1.54 |
115.6 |
-0.26 |
-0.28 |
9.6 |
84 |
5 |
2 |
5 |
11 |
1 |
3 |
0 |
ATP 602 G
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6 |
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1.19 |
1.91 |
162.9 |
-0.39 |
-0.28 |
10.8 |
85 |
6 |
3 |
9 |
10 |
4 |
3 |
0 |
ATP 603 H
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7 |
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1.56 |
1.56 |
178.9 |
-0.95 |
-0.40 |
14.7 |
80 |
8 |
10 |
9 |
8 |
6 |
2 |
0 |
ATP 602 G
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8 |
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1.31 |
2.34 |
198.0 |
-0.30 |
-0.16 |
9.5 |
81 |
6 |
4 |
9 |
14 |
4 |
6 |
1 |
ATP 601 F ATP 603 H
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9 |
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1.06 |
1.06 |
203.9 |
-1.35 |
-0.43 |
19.5 |
83 |
8 |
10 |
10 |
9 |
4 |
0 |
0 |
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10 |
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1.19 |
1.47 |
229.7 |
-0.56 |
-0.18 |
13.4 |
81 |
8 |
10 |
6 |
13 |
7 |
4 |
1 |
ATP 601 F
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11 |
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1.22 |
1.68 |
285.9 |
-0.77 |
-0.32 |
13.4 |
84 |
12 |
10 |
12 |
14 |
5 |
2 |
0 |
ATP 603 H
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12 |
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1.74 |
3.82 |
87.4 |
-0.33 |
-0.02 |
7.1 |
72 |
4 |
3 |
3 |
4 |
5 |
4 |
0 |
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13 |
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1.84 |
3.76 |
92.5 |
-0.29 |
-0.04 |
6.9 |
74 |
4 |
3 |
2 |
4 |
5 |
4 |
0 |
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14 |
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1.32 |
2.14 |
118.5 |
-0.20 |
-0.06 |
6.8 |
83 |
2 |
4 |
9 |
8 |
2 |
3 |
0 |
ATP 603 D
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15 |
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1.72 |
1.75 |
123.6 |
-0.63 |
-0.09 |
10.8 |
75 |
6 |
7 |
5 |
6 |
6 |
4 |
0 |
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16 |
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1.81 |
3.77 |
128.7 |
-0.72 |
-0.15 |
10.1 |
77 |
7 |
6 |
6 |
6 |
6 |
4 |
0 |
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17 |
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1.53 |
2.47 |
64.3 |
-1.18 |
-0.39 |
16.0 |
86 |
7 |
2 |
4 |
3 |
3 |
0 |
0 |
ATP 601 A ATP 602 A ATP 601 E ATP 602 E MG 604 E
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18 |
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1.33 |
1.52 |
25.8 |
-0.33 |
-0.43 |
6.9 |
97 |
2 |
0 |
3 |
1 |
0 |
0 |
0 |
MG 605 C ATP 601 H ATP 602 H
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19 |
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2.15 |
2.15 |
29.1 |
-1.16 |
-0.31 |
17.5 |
77 |
3 |
1 |
1 |
1 |
2 |
0 |
0 |
ATP 602 C
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20 |
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1.60 |
1.60 |
36.9 |
-0.64 |
0.06 |
20.3 |
74 |
2 |
2 |
1 |
3 |
3 |
0 |
0 |
ATP 602 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program