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PDBsum entry 5kjd
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Tunnel analysis for: 5kjd calculated with  MOLE 2.0
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PDB id
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5kjd
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.32 |
63.8 |
-0.18 |
0.12 |
9.4 |
66 |
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2 |
3 |
2 |
6 |
9 |
2 |
0 |
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2 |
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1.32 |
1.32 |
74.7 |
0.73 |
0.35 |
5.8 |
65 |
3 |
1 |
1 |
11 |
13 |
2 |
0 |
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3 |
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1.91 |
2.50 |
26.5 |
-0.97 |
-0.14 |
17.4 |
81 |
4 |
2 |
3 |
3 |
1 |
3 |
0 |
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4 |
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1.19 |
1.20 |
19.1 |
0.73 |
0.20 |
12.4 |
85 |
2 |
1 |
1 |
5 |
1 |
0 |
0 |
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5 |
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1.32 |
4.08 |
15.1 |
0.63 |
0.41 |
9.2 |
53 |
1 |
0 |
0 |
5 |
2 |
0 |
0 |
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6 |
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1.37 |
4.24 |
16.5 |
0.27 |
0.17 |
10.4 |
55 |
2 |
0 |
0 |
5 |
2 |
0 |
0 |
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7 |
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1.32 |
4.09 |
15.0 |
0.63 |
0.41 |
9.2 |
53 |
1 |
0 |
0 |
5 |
2 |
0 |
0 |
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8 |
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1.13 |
3.59 |
19.5 |
0.09 |
0.13 |
10.0 |
60 |
2 |
0 |
0 |
5 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program