PDBsum entry 5ijc Go to PDB code:  Tunnel analysis for: 5ijc calculated with MOLE 2.0 PDB id 5ijc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.82 2.30 18.6 -1.78 -0.27 25.9 81 3 2 3 3 1 0 0   2 1.82 2.24 19.9 -2.80 -0.44 37.9 80 4 4 1 2 1 0 0   3 1.12 3.16 15.5 2.68 0.87 1.7 65 0 1 0 7 2 1 2   4 1.09 4.25 38.9 2.06 0.57 4.1 62 0 2 1 12 4 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.