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PDBsum entry 5c0c
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Pore analysis for: 5c0c calculated with  MOLE 2.0
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PDB id
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5c0c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.27 |
4.84 |
26.2 |
-2.83 |
-0.64 |
36.9 |
84 |
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7 |
5 |
0 |
0 |
0 |
2 |
0 |
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2 |
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1.51 |
1.54 |
30.0 |
-2.60 |
-0.53 |
33.4 |
76 |
6 |
4 |
0 |
0 |
2 |
1 |
0 |
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3 |
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2.33 |
2.53 |
37.6 |
-1.64 |
-0.27 |
17.5 |
78 |
3 |
4 |
3 |
1 |
4 |
1 |
0 |
GOL 309 F
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4 |
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1.91 |
1.88 |
38.5 |
-1.96 |
-0.64 |
25.9 |
84 |
5 |
4 |
3 |
2 |
0 |
2 |
0 |
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5 |
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1.52 |
1.55 |
41.0 |
-1.54 |
-0.61 |
18.2 |
78 |
4 |
3 |
3 |
2 |
2 |
1 |
0 |
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6 |
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2.40 |
2.60 |
44.1 |
-2.06 |
-0.48 |
30.3 |
88 |
10 |
4 |
1 |
3 |
0 |
1 |
0 |
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7 |
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2.57 |
2.58 |
49.2 |
-2.03 |
-0.65 |
26.5 |
88 |
4 |
6 |
6 |
3 |
0 |
1 |
0 |
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8 |
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1.92 |
1.86 |
49.7 |
-2.21 |
-0.65 |
28.4 |
84 |
8 |
5 |
3 |
2 |
0 |
2 |
0 |
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9 |
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2.46 |
2.63 |
54.1 |
-1.92 |
-0.44 |
23.9 |
79 |
5 |
5 |
3 |
2 |
4 |
1 |
0 |
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10 |
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2.41 |
3.04 |
61.1 |
-1.61 |
-0.35 |
17.2 |
80 |
6 |
4 |
5 |
2 |
4 |
1 |
0 |
GOL 309 F
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11 |
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1.80 |
2.13 |
66.6 |
-1.75 |
-0.51 |
27.2 |
85 |
7 |
9 |
3 |
5 |
1 |
1 |
0 |
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12 |
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1.53 |
1.55 |
75.2 |
-1.17 |
-0.25 |
15.3 |
75 |
7 |
6 |
3 |
5 |
8 |
1 |
0 |
GOL 309 F
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13 |
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1.77 |
2.12 |
82.0 |
-1.75 |
-0.37 |
23.3 |
80 |
11 |
8 |
3 |
5 |
5 |
2 |
0 |
GOL 309 F
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14 |
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2.59 |
2.61 |
104.7 |
-2.04 |
-0.57 |
28.8 |
86 |
7 |
9 |
5 |
5 |
0 |
1 |
0 |
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15 |
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2.53 |
3.21 |
117.8 |
-2.02 |
-0.45 |
25.3 |
82 |
9 |
10 |
5 |
3 |
4 |
1 |
0 |
GOL 309 F
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16 |
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2.36 |
2.46 |
131.4 |
-2.15 |
-0.61 |
28.1 |
83 |
7 |
15 |
6 |
4 |
4 |
1 |
0 |
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17 |
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2.30 |
2.42 |
132.9 |
-2.13 |
-0.58 |
29.9 |
85 |
9 |
13 |
7 |
5 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program