PDBsum entry 5c0c Go to PDB code:  Tunnel analysis for: 5c0c calculated with MOLE 2.0 PDB id 5c0c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 2.25 22.9 -2.00 0.01 13.9 66 4 1 1 1 5 1 0   2 1.13 2.42 27.5 -2.07 -0.22 17.5 65 3 1 1 1 5 1 0   3 1.43 1.42 27.7 -1.78 -0.05 11.1 68 3 1 1 2 5 1 0   4 1.26 2.17 25.6 -1.12 -0.16 15.2 75 2 3 2 3 4 0 0  EDO 302 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.