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PDBsum entry 5byt

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5byt calculated with MOLE 2.0 PDB id
5byt
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.07 1.36 69.1 -1.52 -0.55 16.4 85 5 3 4 3 1 3 0  PRP 402 A
2 1.12 1.20 38.0 -1.64 -0.54 16.1 89 5 1 4 2 0 2 0  PRP 402 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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