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PDBsum entry 5ar7

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5ar7 calculated with MOLE 2.0 PDB id
5ar7
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.93 34.0 -1.96 -0.34 22.4 82 4 0 2 3 3 2 0  
2 2.31 3.26 38.4 -2.92 -0.52 28.1 79 7 7 5 1 2 2 0  
3 1.51 1.70 43.2 -2.27 -0.44 24.1 73 6 6 2 3 2 4 0  
4 1.51 1.64 46.9 -2.00 -0.45 18.4 77 5 3 3 3 2 4 0  
5 1.66 1.86 49.6 -2.10 -0.41 22.8 73 7 5 2 3 3 4 0  
6 1.67 1.84 57.0 -1.86 -0.44 16.9 74 7 5 3 2 3 5 0  
7 1.56 3.15 64.4 -0.65 -0.30 16.9 80 3 4 1 5 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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