PDBsum entry 5ar7 Go to PDB code:  Tunnel analysis for: 5ar7 calculated with MOLE 2.0 PDB id 5ar7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.64 28.3 -0.96 -0.37 11.5 78 2 1 0 4 1 2 0   2 1.52 1.58 32.4 -2.33 -0.45 25.0 77 7 6 2 2 1 3 0   3 1.50 1.50 33.0 -0.94 -0.35 11.4 79 2 1 0 4 1 3 0   4 1.50 1.50 34.4 -0.87 -0.25 12.7 73 3 2 0 5 1 3 0   5 1.50 1.50 38.9 -1.91 -0.39 20.1 76 6 3 3 2 2 3 0   6 1.49 1.49 43.3 -2.24 -0.48 20.2 79 7 3 4 1 2 3 0   7 1.40 1.81 47.4 -2.30 -0.54 20.9 80 8 4 3 1 1 3 0   8 1.14 2.29 31.2 1.19 0.25 4.1 81 1 1 2 7 2 1 1   9 1.17 1.17 16.4 0.09 -0.38 3.2 62 0 1 1 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.