PDBsum entry 5af7 Go to PDB code:  Pore analysis for: 5af7 calculated with MOLE 2.0 PDB id 5af7 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.90 31.8 -0.28 -0.03 4.4 80 1 1 5 4 3 0 0  FAD 410 A 2 1.71 2.30 33.5 -0.36 -0.08 6.9 80 2 0 6 3 4 0 0  FAD 410 A 3 1.73 1.89 34.7 -0.58 -0.39 7.2 86 3 0 6 4 5 1 0  FAD 410 B 4 1.82 2.55 36.8 -0.61 -0.18 7.5 78 2 1 4 4 3 1 0  FAD 410 B 5 1.73 1.88 37.9 -0.36 -0.10 8.5 80 2 1 5 5 4 0 0  FAD 410 B 6 1.71 2.33 39.3 -0.76 -0.33 8.8 88 3 0 5 5 4 0 0  FAD 410 A 7 1.24 1.90 55.6 -1.20 -0.16 18.8 82 4 5 4 5 2 0 0  FAD 410 A 8 1.25 1.90 56.2 -1.57 -0.28 20.8 80 5 5 5 4 3 0 0  FAD 410 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.