PDBsum entry 4y8h Go to PDB code:  Pore analysis for: 4y8h calculated with MOLE 2.0 PDB id 4y8h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.76 1.91 89.1 -1.75 -0.43 23.6 86 8 10 8 9 3 3 0   2 1.40 1.34 129.9 -2.22 -0.45 24.0 81 18 11 9 5 7 0 0   3 1.94 2.15 139.5 -1.39 -0.24 20.0 77 14 11 7 7 5 5 0   4 1.68 2.68 146.1 -2.04 -0.33 23.1 78 19 6 6 7 6 3 0   5 1.66 2.67 152.7 -1.95 -0.34 20.8 81 15 8 11 7 8 3 0   6 1.43 3.84 153.0 -2.32 -0.45 24.4 81 16 9 11 5 6 2 0   7 1.19 1.32 154.4 -1.56 -0.29 20.6 78 18 4 7 9 5 3 0   8 1.53 3.91 156.3 -2.33 -0.39 28.0 77 21 7 7 7 6 3 0   9 1.53 3.89 163.0 -2.20 -0.42 24.8 80 17 9 12 7 7 3 0   10 1.97 3.58 160.7 -2.21 -0.46 24.4 84 18 9 11 6 6 3 0   11 1.85 3.14 166.9 -1.96 -0.40 22.1 83 16 10 11 9 7 2 0   12 1.23 1.36 188.1 -2.02 -0.41 25.2 80 22 11 8 9 5 3 0   13 1.28 1.19 189.2 -1.93 -0.44 19.4 85 15 11 17 11 6 2 0   14 1.42 2.53 194.4 -1.68 -0.26 21.5 76 24 11 9 9 10 4 0   15 1.40 1.63 201.9 -1.89 -0.40 22.0 83 16 12 12 10 6 3 0   16 1.26 3.79 204.7 -1.90 -0.32 24.9 75 26 12 10 9 10 4 0   17 1.15 2.05 212.2 -2.32 -0.35 25.5 78 23 10 11 7 10 4 0   18 1.44 4.51 217.4 -2.61 -0.44 27.4 81 24 7 12 5 6 2 0   19 1.85 2.27 230.6 -1.76 -0.30 22.2 79 21 15 14 11 10 5 0   20 1.97 1.98 225.0 -2.46 -0.45 26.8 83 26 7 12 7 6 3 0   21 1.92 2.16 228.6 -2.51 -0.46 26.1 81 23 8 10 5 6 2 0   22 2.04 2.00 231.2 -2.27 -0.41 25.4 82 24 8 12 9 7 2 0   23 1.21 1.35 236.5 -1.68 -0.33 23.0 78 28 17 11 11 8 4 0   24 1.28 1.18 253.6 -2.18 -0.43 22.1 84 23 9 18 11 6 2 0   25 1.21 2.09 260.6 -2.02 -0.30 23.9 76 28 15 14 8 14 5 0   26 1.40 3.82 265.7 -2.16 -0.35 25.3 78 29 12 15 7 10 3 0   27 1.90 1.98 273.4 -2.06 -0.38 24.6 79 31 12 15 8 10 4 0   28 1.83 2.00 277.0 -2.14 -0.39 24.4 78 28 13 13 7 10 3 0   29 1.90 1.98 279.6 -1.91 -0.33 23.6 79 29 13 15 11 11 3 0   30 1.50 1.48 301.9 -1.91 -0.37 21.2 81 28 14 21 13 10 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.