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PDBsum entry 4x4t
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Pore analysis for: 4x4t calculated with  MOLE 2.0
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PDB id
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4x4t
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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30 pores,
coloured by radius |
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30 pores,
coloured by radius
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30 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
1.91 |
27.2 |
-1.45 |
-0.58 |
16.5 |
84 |
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1 |
3 |
2 |
1 |
0 |
2 |
0 |
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2 |
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2.51 |
2.51 |
42.0 |
-2.70 |
-0.63 |
34.3 |
76 |
9 |
5 |
0 |
0 |
0 |
1 |
0 |
DG 5 G DC 6 G DG 23 G
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3 |
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1.71 |
2.43 |
55.7 |
-1.97 |
-0.39 |
27.6 |
78 |
3 |
4 |
1 |
2 |
0 |
1 |
0 |
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4 |
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2.39 |
4.06 |
72.9 |
-2.16 |
-0.49 |
27.7 |
78 |
12 |
7 |
2 |
2 |
1 |
2 |
0 |
GOL 503 A
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5 |
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1.18 |
1.21 |
80.9 |
-1.76 |
-0.55 |
26.8 |
81 |
6 |
11 |
4 |
3 |
4 |
0 |
0 |
C 4 B G 5 B G 28 B C 31 B
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6 |
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1.12 |
1.17 |
82.1 |
-1.81 |
-0.56 |
23.9 |
83 |
5 |
9 |
5 |
3 |
3 |
2 |
0 |
C 31 B
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7 |
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2.36 |
4.02 |
81.9 |
-2.36 |
-0.45 |
31.6 |
78 |
14 |
9 |
3 |
3 |
1 |
2 |
0 |
DG 1 G DG 23 G DC 24 G
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8 |
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2.94 |
4.01 |
85.6 |
-2.28 |
-0.57 |
32.2 |
78 |
8 |
9 |
2 |
2 |
2 |
0 |
0 |
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9 |
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3.09 |
3.53 |
86.1 |
-2.22 |
-0.51 |
29.4 |
78 |
10 |
12 |
2 |
4 |
3 |
1 |
0 |
GOL 503 A DG 1 G DG 23 G
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10 |
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3.03 |
3.54 |
90.5 |
-1.95 |
-0.47 |
23.9 |
73 |
8 |
7 |
2 |
0 |
6 |
0 |
0 |
GOL 503 A G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5B
U 22 B DG 1 G DG 23 G
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11 |
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1.95 |
2.69 |
93.2 |
-2.56 |
-0.43 |
36.8 |
80 |
13 |
10 |
2 |
2 |
2 |
0 |
0 |
DG 1 G DG 23 G DC 24 G
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12 |
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3.33 |
3.60 |
96.0 |
-2.43 |
-0.68 |
32.3 |
76 |
10 |
12 |
2 |
3 |
2 |
1 |
0 |
G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5BU 22 B
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13 |
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2.59 |
5.23 |
99.0 |
-2.34 |
-0.58 |
29.1 |
79 |
16 |
9 |
3 |
1 |
2 |
0 |
0 |
G 12 D 5BU 13 D U 14 D U 19 D C 20 D DG 1 G DG 2
G DC 3 G DC 4 G DG 5 G DC 6 G DG 7 G DG 23 G DC
24 G DC 25 G DG 26 G DC 27 G DG 28 G
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14 |
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2.41 |
2.42 |
99.8 |
-1.22 |
-0.62 |
14.8 |
81 |
7 |
3 |
2 |
1 |
2 |
0 |
0 |
G 1 B G 2 B C 3 B C 4 B G 5 B C 6 B G 11 B G 12 B
5BU 13 B U 14 B G 16 B C 21 B 5BU 22 B G 23 B C
24 B C 25 B G 26 B C 27 B G 28 B A 29 B 5BU 30 B
C 31 B
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15 |
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1.14 |
1.18 |
108.6 |
-1.99 |
-0.59 |
28.3 |
80 |
8 |
11 |
3 |
3 |
3 |
0 |
0 |
C 31 B
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16 |
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2.75 |
4.21 |
123.2 |
-2.29 |
-0.53 |
30.9 |
79 |
17 |
15 |
3 |
6 |
2 |
3 |
0 |
DG 1 G DG 23 G
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17 |
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2.66 |
5.37 |
123.3 |
-1.97 |
-0.71 |
23.4 |
78 |
15 |
10 |
2 |
0 |
1 |
0 |
0 |
G 1 D G 2 D C 3 D C 4 D G 5 D C 6 D U 19 D C 20 D
C 21 D 5BU 22 D G 23 D C 24 D C 25 D G 26 D C 27
D DG 1 G DG 2 G DC 3 G DC 4 G DG 5 G DC 6 G DG 7
G DG 23 G DC 24 G DC 25 G DG 26 G DC 27 G DG 28 G
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18 |
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3.50 |
3.52 |
125.2 |
-1.99 |
-0.49 |
30.2 |
78 |
14 |
13 |
3 |
5 |
3 |
0 |
0 |
DC 4 G DG 5 G DC 6 G DG 26 G DC 27 G DG 28 G
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19 |
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3.52 |
3.74 |
127.2 |
-2.31 |
-0.49 |
31.8 |
77 |
14 |
16 |
3 |
5 |
6 |
1 |
0 |
DG 1 G DG 2 G DG 23 G DC 24 G DC 25 G
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20 |
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2.65 |
5.17 |
127.9 |
-2.39 |
-0.69 |
28.4 |
77 |
17 |
14 |
3 |
0 |
2 |
2 |
0 |
C 4 D G 5 D U 19 D C 20 D C 21 D DG 1 G DG 2 G DC
3 G DC 4 G DG 5 G DC 6 G DG 7 G DG 23 G DC 24 G
DC 25 G DG 26 G DC 27 G DG 28 G
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21 |
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1.57 |
1.73 |
128.0 |
-1.79 |
-0.57 |
25.4 |
77 |
10 |
5 |
1 |
2 |
2 |
0 |
0 |
G 5 B G 11 B G 12 B 5BU 13 B U 14 B G 16 B C 21 B
5BU 22 B G 23 B
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22 |
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3.45 |
3.45 |
131.6 |
-2.09 |
-0.46 |
28.8 |
74 |
12 |
11 |
3 |
1 |
9 |
0 |
0 |
G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5BU 22 B DG
1 G DG 2 G DG 23 G DC 24 G DC 25 G
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23 |
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2.51 |
2.51 |
132.7 |
-2.12 |
-0.62 |
29.9 |
78 |
15 |
16 |
4 |
3 |
3 |
2 |
0 |
G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5BU 22 B DC
4 G DG 5 G DC 6 G DG 26 G DC 27 G
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24 |
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1.90 |
2.71 |
145.3 |
-2.37 |
-0.50 |
33.9 |
80 |
18 |
16 |
3 |
6 |
3 |
1 |
0 |
DG 1 G DG 23 G
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25 |
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3.13 |
3.95 |
147.5 |
-2.19 |
-0.47 |
27.3 |
75 |
15 |
10 |
4 |
1 |
9 |
0 |
0 |
G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5BU 22 B DG
1 G DG 2 G DG 23 G DC 24 G
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26 |
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1.20 |
1.22 |
159.6 |
-1.80 |
-0.61 |
23.5 |
80 |
12 |
16 |
5 |
5 |
5 |
1 |
0 |
G 1 B G 2 B C 3 B C 4 B G 5 B C 6 B G 11 B G 12 B
C 21 B 5BU 22 B G 23 B C 24 B C 25 B G 26 B C 27
B G 28 B A 29 B 5BU 30 B C 31 B
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27 |
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1.86 |
2.71 |
156.9 |
-2.27 |
-0.50 |
29.5 |
81 |
19 |
12 |
4 |
5 |
1 |
2 |
0 |
G 12 D 5BU 13 D U 14 D U 19 D C 20 D DG 1 G DG 28
G
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28 |
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1.80 |
1.77 |
162.5 |
-1.51 |
-0.46 |
21.3 |
77 |
12 |
7 |
1 |
3 |
2 |
2 |
0 |
G 1 B G 2 B C 3 B C 4 B G 5 B C 6 B G 11 B G 12 B
5BU 13 B U 14 B G 16 B C 21 B 5BU 22 B G 23 B C
24 B C 25 B G 26 B C 27 B
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29 |
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3.38 |
3.44 |
168.7 |
-2.19 |
-0.62 |
29.6 |
78 |
17 |
19 |
5 |
5 |
3 |
0 |
0 |
C 4 D G 5 D U 19 D C 20 D C 21 D DC 4 G DG 5 G DC
6 G DG 7 G DG 26 G DC 27 G DG 28 G DA 29 G
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30 |
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3.37 |
3.44 |
169.7 |
-2.29 |
-0.60 |
28.1 |
78 |
18 |
15 |
6 |
1 |
6 |
0 |
0 |
G 11 B G 12 B 5BU 13 B U 14 B G 16 B 5BU 22 B C 4
D G 5 D U 19 D C 20 D C 21 D DG 1 G DG 23 G DG 28
G
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program