PDBsum entry 4wzm

Tunnel analysis for: 4wzm calculated with

MOLE 2.0

PDB id

4wzm

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

7 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.36

2.94

28.0

-1.26

-0.03

29.0

88

7

2

1

6

1

0

0

2

1.24

2.09

30.0

-1.04

0.03

27.1

89

7

2

1

5

1

0

0

3

1.36

2.93

31.5

-1.44

-0.16

28.4

90

7

2

2

6

1

0

0

4

1.23

2.18

33.5

-1.25

-0.07

27.3

90

7

2

2

5

1

0

0

5

1.36

2.93

43.4

-2.02

-0.31

31.7

86

8

4

1

7

2

1

0

6

1.24

2.18

45.3

-1.91

-0.30

30.6

86

8

4

1

6

2

1

0

7

1.36

2.93

62.8

-2.28

-0.42

33.1

87

9

4

1

6

1

0

0

U 904 B G 916 C G 917 C C 918 C C 919 C C 920 C

8

1.30

1.29

15.5

-1.32

-0.24

12.6

74

1

1

2

3

3

0

0

GOL 501 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.